Combining a SEP IRA with other retirement accounts
If you have a SEP IRA, you can still establish other types of retirement accounts. But because a SEP IRA is an employer-sponsored retirement plan, the IRS imposes some additional restrictions on your ability to contribute to other retirement funds.
SEP IRAs combined with traditional IRAs
If you participate in a SEP IRA, you can still open a traditional IRA. But if your employer contributes to your SEP IRA and you earn more than a certain amount of income, your contributions to your traditional IRA are not fully tax-deductible.
For 2025, the tax deduction starts phasing out when your modified adjusted gross income reaches $79,000 for individuals and $126,000 for people married filing jointly. In 2026, these thresholds increase to $81,000 for single filers and $129,000 for married couples filing a joint tax return.
SEP IRAs combined with Roth IRAs
You can establish a Roth IRA even if you participate in a SEP IRA. The maximum amount that you are annually allowed to contribute to a Roth IRA is unaffected by holding any employer-sponsored plan such as a SEP IRA. However, the ability to contribute to a Roth is restricted for all high earners.
SEP IRAs combined with 401(k)s
You are unlikely to have a SEP IRA and a 401(k) from the same employer since the annual contribution limits for employers apply to both types of accounts combined. If you have two separate jobs offering two retirement plans, you can fully participate in both employer-sponsored retirement plans. You can have a SEP IRA at one job and a 401(k) at the other.
SEP IRAs combined with HSAs
You can contribute to both a SEP IRA and a health savings account (HSA). SEP IRA contributions don't affect HSA contribution limits or the tax treatment of HSA contributions. If your employer offers both a SEP IRA and an HSA and contributes matching funds to the HSA, those HSA funds are not counted as income to you as an employee.
How to open a SEP IRA
Opening a SEP IRA is very simple. Most banks and brokerages offer a pre-approved SEP IRA plan prototype that meets IRS standards. The IRS also offers business owners the option of using its own model SEP or a custom plan.